Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL81887.1 | EFL82562.1 | HMPREF0189_01741 | HMPREF0189_01057 | Hypothetical protein. | ACT domain protein. | 0.742 |
EFL81887.1 | EFL83271.1 | HMPREF0189_01741 | HMPREF0189_00348 | Hypothetical protein. | Tat pathway signal sequence domain protein. | 0.654 |
EFL81887.1 | EFL83272.1 | HMPREF0189_01741 | HMPREF0189_00349 | Hypothetical protein. | Hypothetical protein. | 0.670 |
EFL82562.1 | EFL81887.1 | HMPREF0189_01057 | HMPREF0189_01741 | ACT domain protein. | Hypothetical protein. | 0.742 |
EFL82562.1 | EFL82563.1 | HMPREF0189_01057 | HMPREF0189_01058 | ACT domain protein. | Hypothetical protein. | 0.878 |
EFL82562.1 | EFL82564.1 | HMPREF0189_01057 | HMPREF0189_01059 | ACT domain protein. | Endoribonuclease L-PSP. | 0.672 |
EFL82562.1 | EFL83271.1 | HMPREF0189_01057 | HMPREF0189_00348 | ACT domain protein. | Tat pathway signal sequence domain protein. | 0.589 |
EFL82562.1 | EFL83272.1 | HMPREF0189_01057 | HMPREF0189_00349 | ACT domain protein. | Hypothetical protein. | 0.594 |
EFL82562.1 | cysK | HMPREF0189_01057 | HMPREF0189_01636 | ACT domain protein. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.621 |
EFL82562.1 | dapA | HMPREF0189_01057 | HMPREF0189_02276 | ACT domain protein. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.649 |
EFL82562.1 | glyA | HMPREF0189_01057 | HMPREF0189_02095 | ACT domain protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.621 |
EFL82562.1 | metG | HMPREF0189_01057 | HMPREF0189_01347 | ACT domain protein. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.635 |
EFL82562.1 | thrB | HMPREF0189_01057 | HMPREF0189_01567 | ACT domain protein. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.619 |
EFL82563.1 | EFL82562.1 | HMPREF0189_01058 | HMPREF0189_01057 | Hypothetical protein. | ACT domain protein. | 0.878 |
EFL82563.1 | EFL82564.1 | HMPREF0189_01058 | HMPREF0189_01059 | Hypothetical protein. | Endoribonuclease L-PSP. | 0.735 |
EFL82564.1 | EFL82562.1 | HMPREF0189_01059 | HMPREF0189_01057 | Endoribonuclease L-PSP. | ACT domain protein. | 0.672 |
EFL82564.1 | EFL82563.1 | HMPREF0189_01059 | HMPREF0189_01058 | Endoribonuclease L-PSP. | Hypothetical protein. | 0.735 |
EFL83271.1 | EFL81887.1 | HMPREF0189_00348 | HMPREF0189_01741 | Tat pathway signal sequence domain protein. | Hypothetical protein. | 0.654 |
EFL83271.1 | EFL82562.1 | HMPREF0189_00348 | HMPREF0189_01057 | Tat pathway signal sequence domain protein. | ACT domain protein. | 0.589 |
EFL83271.1 | EFL83272.1 | HMPREF0189_00348 | HMPREF0189_00349 | Tat pathway signal sequence domain protein. | Hypothetical protein. | 0.943 |
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