STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL82567.1Nodulation efficiency protein D. (157 aa)    
Predicted Functional Partners:
EFL82566.1
SPFH/Band 7/PHB domain protein.
 
  
 0.856
EFL82568.1
Peptidase dimerization domain protein.
       0.773
EFL83411.1
Hypothetical protein.
  
     0.749
priB
Hypothetical protein; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
  
     0.705
EFL84075.1
Hypothetical protein.
  
     0.695
EFL83285.1
Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
  
    0.617
EFL81993.1
Hypothetical protein.
  
     0.603
EFL84082.1
Hypothetical protein.
  
     0.602
EFL82001.1
Hypothetical protein.
  
     0.599
EFL83989.1
Gram-negative porin.
  
     0.593
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.