Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL82802.1 | EFL82803.1 | HMPREF0189_01298 | HMPREF0189_01299 | Molybdenum cofactor synthesis domain protein. | Hypothetical protein; Belongs to the UPF0307 family. | 0.791 |
EFL82802.1 | pmbA | HMPREF0189_01298 | HMPREF0189_01300 | Molybdenum cofactor synthesis domain protein. | Protein PmbA. | 0.587 |
EFL82803.1 | EFL82802.1 | HMPREF0189_01299 | HMPREF0189_01298 | Hypothetical protein; Belongs to the UPF0307 family. | Molybdenum cofactor synthesis domain protein. | 0.791 |
EFL82803.1 | pmbA | HMPREF0189_01299 | HMPREF0189_01300 | Hypothetical protein; Belongs to the UPF0307 family. | Protein PmbA. | 0.589 |
EFL82805.1 | EFL82806.1 | HMPREF0189_01301 | HMPREF0189_01302 | Putative branched-chain-amino-acid transaminase; Overlaps another CDS with the same product name. | Hypothetical protein; Overlaps another CDS with the same product name. | 0.994 |
EFL82805.1 | pmbA | HMPREF0189_01301 | HMPREF0189_01300 | Putative branched-chain-amino-acid transaminase; Overlaps another CDS with the same product name. | Protein PmbA. | 0.516 |
EFL82806.1 | EFL82805.1 | HMPREF0189_01302 | HMPREF0189_01301 | Hypothetical protein; Overlaps another CDS with the same product name. | Putative branched-chain-amino-acid transaminase; Overlaps another CDS with the same product name. | 0.994 |
EFL82806.1 | pmbA | HMPREF0189_01302 | HMPREF0189_01300 | Hypothetical protein; Overlaps another CDS with the same product name. | Protein PmbA. | 0.516 |
EFL83176.1 | pmbA | HMPREF0189_00253 | HMPREF0189_01300 | TldD/PmbA family protein. | Protein PmbA. | 0.920 |
pmbA | EFL82802.1 | HMPREF0189_01300 | HMPREF0189_01298 | Protein PmbA. | Molybdenum cofactor synthesis domain protein. | 0.587 |
pmbA | EFL82803.1 | HMPREF0189_01300 | HMPREF0189_01299 | Protein PmbA. | Hypothetical protein; Belongs to the UPF0307 family. | 0.589 |
pmbA | EFL82805.1 | HMPREF0189_01300 | HMPREF0189_01301 | Protein PmbA. | Putative branched-chain-amino-acid transaminase; Overlaps another CDS with the same product name. | 0.516 |
pmbA | EFL82806.1 | HMPREF0189_01300 | HMPREF0189_01302 | Protein PmbA. | Hypothetical protein; Overlaps another CDS with the same product name. | 0.516 |
pmbA | EFL83176.1 | HMPREF0189_01300 | HMPREF0189_00253 | Protein PmbA. | TldD/PmbA family protein. | 0.920 |
pmbA | zapD | HMPREF0189_01300 | HMPREF0189_02044 | Protein PmbA. | Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.446 |
zapD | pmbA | HMPREF0189_02044 | HMPREF0189_01300 | Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | Protein PmbA. | 0.446 |