STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL82282.1Putative anaerobic C4-dicarboxylate transporter DcuC. (456 aa)    
Predicted Functional Partners:
EFL82283.1
YbaK/proline--tRNA ligase associated domain protein.
       0.596
EFL82409.1
Transporter gate domain protein.
  
     0.554
EFL82408.1
Transporter gate domain protein.
  
     0.538
EFL82281.1
Putative adenosine deaminase.
       0.488
EFL83353.1
Amidohydrolase family protein.
  
     0.475
EFL81854.1
Transporter gate domain protein.
  
     0.429
EFL81853.1
Hypothetical protein.
  
     0.428
EFL83875.1
Hypothetical protein.
  
     0.417
EFL83153.1
Peptidase dimerization domain protein.
  
     0.411
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.