Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL82195.1 | EFL82405.1 | HMPREF0189_01915 | HMPREF0189_01647 | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Radical SAM domain protein. | 0.578 |
EFL82195.1 | EFL83156.1 | HMPREF0189_01915 | HMPREF0189_00233 | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Putative protoporphyrinogen oxidase. | 0.804 |
EFL82195.1 | hemE | HMPREF0189_01915 | HMPREF0189_00041 | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.846 |
EFL82367.1 | EFL82369.1 | HMPREF0189_01609 | HMPREF0189_01611 | TonB-dependent receptor plug domain protein. | Cobalt transport protein. | 0.881 |
EFL82367.1 | EFL82371.1 | HMPREF0189_01609 | HMPREF0189_01613 | TonB-dependent receptor plug domain protein. | Hypothetical protein. | 0.857 |
EFL82367.1 | EFL82372.1 | HMPREF0189_01609 | HMPREF0189_01614 | TonB-dependent receptor plug domain protein. | Hypothetical protein. | 0.826 |
EFL82367.1 | EFL82405.1 | HMPREF0189_01609 | HMPREF0189_01647 | TonB-dependent receptor plug domain protein. | Radical SAM domain protein. | 0.469 |
EFL82369.1 | EFL82367.1 | HMPREF0189_01611 | HMPREF0189_01609 | Cobalt transport protein. | TonB-dependent receptor plug domain protein. | 0.881 |
EFL82369.1 | EFL82371.1 | HMPREF0189_01611 | HMPREF0189_01613 | Cobalt transport protein. | Hypothetical protein. | 0.870 |
EFL82369.1 | EFL82372.1 | HMPREF0189_01611 | HMPREF0189_01614 | Cobalt transport protein. | Hypothetical protein. | 0.882 |
EFL82369.1 | EFL82405.1 | HMPREF0189_01611 | HMPREF0189_01647 | Cobalt transport protein. | Radical SAM domain protein. | 0.454 |
EFL82371.1 | EFL82367.1 | HMPREF0189_01613 | HMPREF0189_01609 | Hypothetical protein. | TonB-dependent receptor plug domain protein. | 0.857 |
EFL82371.1 | EFL82369.1 | HMPREF0189_01613 | HMPREF0189_01611 | Hypothetical protein. | Cobalt transport protein. | 0.870 |
EFL82371.1 | EFL82372.1 | HMPREF0189_01613 | HMPREF0189_01614 | Hypothetical protein. | Hypothetical protein. | 0.820 |
EFL82371.1 | EFL82405.1 | HMPREF0189_01613 | HMPREF0189_01647 | Hypothetical protein. | Radical SAM domain protein. | 0.789 |
EFL82372.1 | EFL82367.1 | HMPREF0189_01614 | HMPREF0189_01609 | Hypothetical protein. | TonB-dependent receptor plug domain protein. | 0.826 |
EFL82372.1 | EFL82369.1 | HMPREF0189_01614 | HMPREF0189_01611 | Hypothetical protein. | Cobalt transport protein. | 0.882 |
EFL82372.1 | EFL82371.1 | HMPREF0189_01614 | HMPREF0189_01613 | Hypothetical protein. | Hypothetical protein. | 0.820 |
EFL82372.1 | EFL82405.1 | HMPREF0189_01614 | HMPREF0189_01647 | Hypothetical protein. | Radical SAM domain protein. | 0.727 |
EFL82404.1 | EFL82405.1 | HMPREF0189_01646 | HMPREF0189_01647 | Hypothetical protein. | Radical SAM domain protein. | 0.543 |
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