STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL82426.1NADP-dependent malic enzyme (NADP-ME) (SrfA-induced geneA protein). (541 aa)    
Predicted Functional Partners:
fumA
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.817
EFL84103.1
FAD binding domain protein.
  
 
 0.745
EFL83881.1
4Fe-4S binding domain protein.
  
 
 0.724
EFL82330.1
Pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.692
EFL83880.1
4Fe-4S binding domain protein.
    
 0.676
EFL82468.1
2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family.
  
 
 0.666
napG
Ferredoxin-type protein NapG.
    
 0.653
aspA
Aspartate ammonia-lyase.
  
 
 0.640
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.636
EFL83337.1
Putative CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase.
    
 0.617
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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