STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL81929.1Peptidase dimerization domain protein. (371 aa)    
Predicted Functional Partners:
EFL82838.1
Putative diaminopropionate ammonia-lyase.
  
 0.907
argD
Aminotransferase, acetylornithine/succinylornithine family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 
 0.729
nhaC
Na+/H+ antiporter NhaC.
 
     0.707
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.705
argF-2
Ornithine carbamoyltransferase.
  
 
 0.705
argA
Amino-acid N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily.
  
 
 0.696
EFL84103.1
FAD binding domain protein.
   
 0.671
EFL82468.1
2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family.
  
 
  0.638
EFL83880.1
4Fe-4S binding domain protein.
    
  0.630
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
  
 0.563
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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