STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL81939.1Periplasmic copper-binding protein (NosD). (427 aa)    
Predicted Functional Partners:
EFL81937.1
Putative membrane protein NosY.
 
 0.999
EFL81940.1
NosL.
 
 
 0.997
EFL81938.1
Putative copper ABC transporter, ATP-binding protein NosF.
 0.994
EFL81934.1
Antioxidant, AhpC/TSA family.
 
     0.720
EFL81941.1
Polysulfide reductase, NrfD.
 
     0.692
EFL81935.1
Cytochrome C-type biogenesis protein CcmH family protein; Possible subunit of a heme lyase.
       0.679
EFL81936.1
Putative cytochrome c-type biogenesis protein CcmF.
       0.679
napA
Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
   
 0.662
EFL83241.1
NapC/NirT cytochrome c family, N-terminal domain protein.
  
    0.651
aroD
3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.
    
 0.636
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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