Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL82051.1 | EFL82052.1 | HMPREF0189_02035 | HMPREF0189_02036 | Type I restriction modification DNA specificity domain protein. | Putative type I restriction-modification system, M subunit. | 0.995 |
EFL82051.1 | EFL82054.1 | HMPREF0189_02035 | HMPREF0189_02038 | Type I restriction modification DNA specificity domain protein. | Putative DNA-invertase from lambdoid prophage Rac. | 0.536 |
EFL82051.1 | EFL82266.1 | HMPREF0189_02035 | HMPREF0189_01986 | Type I restriction modification DNA specificity domain protein. | Hypothetical protein. | 0.947 |
EFL82051.1 | EFL82267.1 | HMPREF0189_02035 | HMPREF0189_01987 | Type I restriction modification DNA specificity domain protein. | N-6 DNA Methylase. | 0.960 |
EFL82051.1 | EFL82793.1 | HMPREF0189_02035 | HMPREF0189_01288 | Type I restriction modification DNA specificity domain protein. | Hypothetical protein. | 0.462 |
EFL82051.1 | EFL82854.1 | HMPREF0189_02035 | HMPREF0189_02155 | Type I restriction modification DNA specificity domain protein. | Hypothetical protein. | 0.975 |
EFL82051.1 | atpF | HMPREF0189_02035 | HMPREF0189_00034 | Type I restriction modification DNA specificity domain protein. | ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.634 |
EFL82051.1 | hsdR | HMPREF0189_02035 | HMPREF0189_02037 | Type I restriction modification DNA specificity domain protein. | Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.994 |
EFL82051.1 | polA | HMPREF0189_02035 | HMPREF0189_01564 | Type I restriction modification DNA specificity domain protein. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.573 |
EFL82052.1 | EFL82051.1 | HMPREF0189_02036 | HMPREF0189_02035 | Putative type I restriction-modification system, M subunit. | Type I restriction modification DNA specificity domain protein. | 0.995 |
EFL82052.1 | EFL82054.1 | HMPREF0189_02036 | HMPREF0189_02038 | Putative type I restriction-modification system, M subunit. | Putative DNA-invertase from lambdoid prophage Rac. | 0.468 |
EFL82052.1 | EFL82267.1 | HMPREF0189_02036 | HMPREF0189_01987 | Putative type I restriction-modification system, M subunit. | N-6 DNA Methylase. | 0.568 |
EFL82052.1 | EFL82854.1 | HMPREF0189_02036 | HMPREF0189_02155 | Putative type I restriction-modification system, M subunit. | Hypothetical protein. | 0.657 |
EFL82052.1 | hsdR | HMPREF0189_02036 | HMPREF0189_02037 | Putative type I restriction-modification system, M subunit. | Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.996 |
EFL82054.1 | EFL82051.1 | HMPREF0189_02038 | HMPREF0189_02035 | Putative DNA-invertase from lambdoid prophage Rac. | Type I restriction modification DNA specificity domain protein. | 0.536 |
EFL82054.1 | EFL82052.1 | HMPREF0189_02038 | HMPREF0189_02036 | Putative DNA-invertase from lambdoid prophage Rac. | Putative type I restriction-modification system, M subunit. | 0.468 |
EFL82054.1 | hsdR | HMPREF0189_02038 | HMPREF0189_02037 | Putative DNA-invertase from lambdoid prophage Rac. | Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.477 |
EFL82266.1 | EFL82051.1 | HMPREF0189_01986 | HMPREF0189_02035 | Hypothetical protein. | Type I restriction modification DNA specificity domain protein. | 0.947 |
EFL82266.1 | EFL82267.1 | HMPREF0189_01986 | HMPREF0189_01987 | Hypothetical protein. | N-6 DNA Methylase. | 0.981 |
EFL82266.1 | hsdR | HMPREF0189_01986 | HMPREF0189_02037 | Hypothetical protein. | Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.907 |
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