Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEO34674.1 | EEO34676.1 | FMAG_00236 | FMAG_00238 | Divergent PAP2 family. | HD domain protein. | 0.787 |
EEO34674.1 | EEO34678.1 | FMAG_00236 | FMAG_00240 | Divergent PAP2 family. | Peptidase, S41 family; Belongs to the peptidase S41A family. | 0.791 |
EEO34674.1 | dxs | FMAG_00236 | FMAG_00237 | Divergent PAP2 family. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.797 |
EEO34674.1 | nadE | FMAG_00236 | FMAG_00243 | Divergent PAP2 family. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.695 |
EEO34674.1 | rrmJ | FMAG_00236 | FMAG_00239 | Divergent PAP2 family. | Ribosomal RNA large subunit methyltransferase J. | 0.792 |
EEO34674.1 | rsmI | FMAG_00236 | FMAG_00241 | Divergent PAP2 family. | S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.767 |
EEO34674.1 | ylqF | FMAG_00236 | FMAG_00242 | Divergent PAP2 family. | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.723 |
EEO34676.1 | EEO34674.1 | FMAG_00238 | FMAG_00236 | HD domain protein. | Divergent PAP2 family. | 0.787 |
EEO34676.1 | EEO34678.1 | FMAG_00238 | FMAG_00240 | HD domain protein. | Peptidase, S41 family; Belongs to the peptidase S41A family. | 0.781 |
EEO34676.1 | dxs | FMAG_00238 | FMAG_00237 | HD domain protein. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.786 |
EEO34676.1 | nadE | FMAG_00238 | FMAG_00243 | HD domain protein. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.702 |
EEO34676.1 | rrmJ | FMAG_00238 | FMAG_00239 | HD domain protein. | Ribosomal RNA large subunit methyltransferase J. | 0.783 |
EEO34676.1 | rsmI | FMAG_00238 | FMAG_00241 | HD domain protein. | S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.754 |
EEO34676.1 | ylqF | FMAG_00238 | FMAG_00242 | HD domain protein. | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.716 |
EEO34678.1 | EEO34674.1 | FMAG_00240 | FMAG_00236 | Peptidase, S41 family; Belongs to the peptidase S41A family. | Divergent PAP2 family. | 0.791 |
EEO34678.1 | EEO34676.1 | FMAG_00240 | FMAG_00238 | Peptidase, S41 family; Belongs to the peptidase S41A family. | HD domain protein. | 0.781 |
EEO34678.1 | dxs | FMAG_00240 | FMAG_00237 | Peptidase, S41 family; Belongs to the peptidase S41A family. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.784 |
EEO34678.1 | nadE | FMAG_00240 | FMAG_00243 | Peptidase, S41 family; Belongs to the peptidase S41A family. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.700 |
EEO34678.1 | rrmJ | FMAG_00240 | FMAG_00239 | Peptidase, S41 family; Belongs to the peptidase S41A family. | Ribosomal RNA large subunit methyltransferase J. | 0.797 |
EEO34678.1 | rsmI | FMAG_00240 | FMAG_00241 | Peptidase, S41 family; Belongs to the peptidase S41A family. | S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.773 |
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