STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrPUracil permease. (418 aa)    
Predicted Functional Partners:
pepF
Oligoendopeptidase F.
     
 0.764
EEO34898.1
Thioesterase family protein.
       0.690
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
  
 0.680
EEO34897.1
Thiamine diphosphokinase.
       0.630
EEO34896.1
Endonuclease/exonuclease/phosphatase family protein.
       0.625
EEO34901.2
Putative permease.
 
  
 0.615
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
  
 0.607
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
  
 0.604
EEO35898.1
Phosphoribosylformylglycinamidine synthase.
  
  
 0.603
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
  
 0.587
Your Current Organism:
Fusobacterium mortiferum
NCBI taxonomy Id: 469616
Other names: F. mortiferum ATCC 9817, Fusobacterium mortiferum ATCC 9817
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.