STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citECitrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family. (290 aa)    
Predicted Functional Partners:
citF
Citrate lyase, alpha subunit.
 
 
 0.995
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
 
 0.995
citC
[citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
  
 0.955
EEO34963.1
Putative L-ribulose-5-phosphate 4-epimerase.
   
    0.654
EEO36472.1
Putative L-ribulose-5-phosphate 4-epimerase.
   
    0.654
EEO35562.1
Methylaspartate ammonia-lyase.
 
     0.603
nifJ
Pyruvate synthase.
  
  
 0.551
glmE
Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
     0.474
EEO35558.1
Hypothetical protein.
       0.471
mamA
Methylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
  
  
 0.465
Your Current Organism:
Fusobacterium mortiferum
NCBI taxonomy Id: 469616
Other names: F. mortiferum ATCC 9817, Fusobacterium mortiferum ATCC 9817
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.