STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yedFSelenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family. (191 aa)    
Predicted Functional Partners:
selB
Selenocysteine-specific translation elongation factor.
 
   
 0.952
nifS
Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
   
 
 0.942
EEO35824.1
Hypothetical protein.
 
   
 0.880
EEO35469.1
2-hydroxyglutaryl-CoA dehydratase, D-component.
 
    0.838
EEO36293.1
Cysteine desulfurase family protein.
 
 
 
 0.762
hgdC
(R)-2-hydroxyglutaryl-CoA dehydratase activator.
 
     0.731
EEO36318.1
Selenium-dependent molybdenum hydroxylase system protein, YqeB family.
 
 
 
 0.568
EEO36834.1
Pyridine nucleotide-disulfide oxidoreductase.
  
  
 0.499
EEO35825.2
PP-loop family protein; Belongs to the TtcA family.
     
 0.484
EEO35826.1
PP-loop family protein; Belongs to the TtcA family.
     
 0.484
Your Current Organism:
Fusobacterium mortiferum
NCBI taxonomy Id: 469616
Other names: F. mortiferum ATCC 9817, Fusobacterium mortiferum ATCC 9817
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