STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hup-3DNA-binding protein HU; Belongs to the bacterial histone-like protein family. (90 aa)    
Predicted Functional Partners:
EEO36248.1
Hypothetical protein.
  
  
 0.583
EEO36246.1
Pyridine nucleotide-disulfide oxidoreductase.
       0.509
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
  
  
 0.465
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
 
 
 0.440
rpsT
Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
  
  
 0.437
bdhA
NADH-dependent butanol dehydrogenase A.
       0.433
EEO35550.1
Putative chorismate mutase.
     
 0.424
Your Current Organism:
Fusobacterium mortiferum
NCBI taxonomy Id: 469616
Other names: F. mortiferum ATCC 9817, Fusobacterium mortiferum ATCC 9817
Server load: low (14%) [HD]