Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEO35550.1 | hup-3 | FMAG_01112 | FMAG_01809 | Putative chorismate mutase. | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | 0.424 |
EEO35550.1 | rpsO | FMAG_01112 | FMAG_01106 | Putative chorismate mutase. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.667 |
EEO36246.1 | bdhA | FMAG_01808 | FMAG_01807 | Pyridine nucleotide-disulfide oxidoreductase. | NADH-dependent butanol dehydrogenase A. | 0.650 |
EEO36246.1 | hup-3 | FMAG_01808 | FMAG_01809 | Pyridine nucleotide-disulfide oxidoreductase. | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | 0.509 |
EEO36248.1 | hup-3 | FMAG_01810 | FMAG_01809 | Hypothetical protein. | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | 0.583 |
bdhA | EEO36246.1 | FMAG_01807 | FMAG_01808 | NADH-dependent butanol dehydrogenase A. | Pyridine nucleotide-disulfide oxidoreductase. | 0.650 |
bdhA | hup-3 | FMAG_01807 | FMAG_01809 | NADH-dependent butanol dehydrogenase A. | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | 0.433 |
hup-3 | EEO35550.1 | FMAG_01809 | FMAG_01112 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | Putative chorismate mutase. | 0.424 |
hup-3 | EEO36246.1 | FMAG_01809 | FMAG_01808 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | Pyridine nucleotide-disulfide oxidoreductase. | 0.509 |
hup-3 | EEO36248.1 | FMAG_01809 | FMAG_01810 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | Hypothetical protein. | 0.583 |
hup-3 | bdhA | FMAG_01809 | FMAG_01807 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | NADH-dependent butanol dehydrogenase A. | 0.433 |
hup-3 | polA | FMAG_01809 | FMAG_00833 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.440 |
hup-3 | rpsO | FMAG_01809 | FMAG_01106 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.465 |
hup-3 | rpsT | FMAG_01809 | FMAG_00771 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.437 |
polA | hup-3 | FMAG_00833 | FMAG_01809 | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | 0.440 |
rpsO | EEO35550.1 | FMAG_01106 | FMAG_01112 | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | Putative chorismate mutase. | 0.667 |
rpsO | hup-3 | FMAG_01106 | FMAG_01809 | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | 0.465 |
rpsO | rpsT | FMAG_01106 | FMAG_00771 | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.992 |
rpsT | hup-3 | FMAG_00771 | FMAG_01809 | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | 0.437 |
rpsT | rpsO | FMAG_00771 | FMAG_01106 | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.992 |