Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEO35751.1 | siaP | FMAG_01313 | FMAG_02467 | TRAP transporter, 4TM/12TM fusion protein. | Sialic acid-binding periplasmic protein SiaP. | 0.494 |
EEO35791.1 | EEO35792.1 | FMAG_01353 | FMAG_01354 | TRAP transporter, DctQ-like membrane protein. | TRAP transporter, DctM subunit. | 0.981 |
EEO35791.1 | siaP | FMAG_01353 | FMAG_02467 | TRAP transporter, DctQ-like membrane protein. | Sialic acid-binding periplasmic protein SiaP. | 0.860 |
EEO35791.1 | siaT | FMAG_01353 | FMAG_02468 | TRAP transporter, DctQ-like membrane protein. | Sialic acid TRAP transporter permease protein SiaT. | 0.920 |
EEO35792.1 | EEO35791.1 | FMAG_01354 | FMAG_01353 | TRAP transporter, DctM subunit. | TRAP transporter, DctQ-like membrane protein. | 0.981 |
EEO35792.1 | siaP | FMAG_01354 | FMAG_02467 | TRAP transporter, DctM subunit. | Sialic acid-binding periplasmic protein SiaP. | 0.848 |
EEO35792.1 | siaT | FMAG_01354 | FMAG_02468 | TRAP transporter, DctM subunit. | Sialic acid TRAP transporter permease protein SiaT. | 0.723 |
EEO36904.1 | siaP | FMAG_02466 | FMAG_02467 | Transcriptional regulator, LacI family. | Sialic acid-binding periplasmic protein SiaP. | 0.673 |
siaP | EEO35751.1 | FMAG_02467 | FMAG_01313 | Sialic acid-binding periplasmic protein SiaP. | TRAP transporter, 4TM/12TM fusion protein. | 0.494 |
siaP | EEO35791.1 | FMAG_02467 | FMAG_01353 | Sialic acid-binding periplasmic protein SiaP. | TRAP transporter, DctQ-like membrane protein. | 0.860 |
siaP | EEO35792.1 | FMAG_02467 | FMAG_01354 | Sialic acid-binding periplasmic protein SiaP. | TRAP transporter, DctM subunit. | 0.848 |
siaP | EEO36904.1 | FMAG_02467 | FMAG_02466 | Sialic acid-binding periplasmic protein SiaP. | Transcriptional regulator, LacI family. | 0.673 |
siaP | siaT | FMAG_02467 | FMAG_02468 | Sialic acid-binding periplasmic protein SiaP. | Sialic acid TRAP transporter permease protein SiaT. | 0.926 |
siaT | EEO35791.1 | FMAG_02468 | FMAG_01353 | Sialic acid TRAP transporter permease protein SiaT. | TRAP transporter, DctQ-like membrane protein. | 0.920 |
siaT | EEO35792.1 | FMAG_02468 | FMAG_01354 | Sialic acid TRAP transporter permease protein SiaT. | TRAP transporter, DctM subunit. | 0.723 |
siaT | siaP | FMAG_02468 | FMAG_02467 | Sialic acid TRAP transporter permease protein SiaT. | Sialic acid-binding periplasmic protein SiaP. | 0.926 |