Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFS24741.1 | EFS24742.2 | FUAG_00256 | FUAG_00257 | Hypothetical protein. | uracil-DNA glycosylase, family 4. | 0.780 |
EFS24741.1 | EFS24743.1 | FUAG_00256 | FUAG_00258 | Hypothetical protein. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.764 |
EFS24741.1 | EFS24744.1 | FUAG_00256 | FUAG_00259 | Hypothetical protein. | UPF0082 protein. | 0.632 |
EFS24741.1 | recG | FUAG_00256 | FUAG_00260 | Hypothetical protein. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.433 |
EFS24742.2 | EFS24741.1 | FUAG_00257 | FUAG_00256 | uracil-DNA glycosylase, family 4. | Hypothetical protein. | 0.780 |
EFS24742.2 | EFS24743.1 | FUAG_00257 | FUAG_00258 | uracil-DNA glycosylase, family 4. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.792 |
EFS24742.2 | EFS24744.1 | FUAG_00257 | FUAG_00259 | uracil-DNA glycosylase, family 4. | UPF0082 protein. | 0.603 |
EFS24742.2 | recG | FUAG_00257 | FUAG_00260 | uracil-DNA glycosylase, family 4. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.434 |
EFS24743.1 | EFS24741.1 | FUAG_00258 | FUAG_00256 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Hypothetical protein. | 0.764 |
EFS24743.1 | EFS24742.2 | FUAG_00258 | FUAG_00257 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | uracil-DNA glycosylase, family 4. | 0.792 |
EFS24743.1 | EFS24744.1 | FUAG_00258 | FUAG_00259 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | UPF0082 protein. | 0.632 |
EFS24743.1 | recG | FUAG_00258 | FUAG_00260 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.455 |
EFS24744.1 | EFS24741.1 | FUAG_00259 | FUAG_00256 | UPF0082 protein. | Hypothetical protein. | 0.632 |
EFS24744.1 | EFS24742.2 | FUAG_00259 | FUAG_00257 | UPF0082 protein. | uracil-DNA glycosylase, family 4. | 0.603 |
EFS24744.1 | EFS24743.1 | FUAG_00259 | FUAG_00258 | UPF0082 protein. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.632 |
EFS24744.1 | aspS | FUAG_00259 | FUAG_01744 | UPF0082 protein. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.592 |
EFS24744.1 | efp | FUAG_00259 | FUAG_02451 | UPF0082 protein. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.544 |
EFS24744.1 | metG | FUAG_00259 | FUAG_00721 | UPF0082 protein. | methionine-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.517 |
EFS24744.1 | recG | FUAG_00259 | FUAG_00260 | UPF0082 protein. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.617 |
EFS24744.1 | rplS | FUAG_00259 | FUAG_02928 | UPF0082 protein. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.567 |
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