STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFS25138.1Hypothetical protein; Belongs to the HpcH/HpaI aldolase family. (290 aa)    
Predicted Functional Partners:
citF
Citrate lyase, alpha subunit.
 
  
 0.974
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.971
citC
[citrate (Pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
  
 0.933
citF-2
Citrate lyase, alpha subunit.
 
  
 0.920
citD-2
Citrate lyase acyl carrier protein.
 
  
 0.913
citX
triphosphoribosyl-dephospho-CoA synthase CitG.
 
  
 0.910
EFS25552.1
Citrate (Pro-3S)-lyase, beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.909
EFS26856.1
L-ribulose-5-phosphate 4-epimerase.
   
    0.700
EFS25136.1
Methylaspartate ammonia-lyase.
       0.461
EFS25143.1
Hypothetical protein.
  
  
 0.460
Your Current Organism:
Fusobacterium ulcerans
NCBI taxonomy Id: 469617
Other names: F. ulcerans ATCC 49185, Fusobacterium ulcerans ATCC 49185
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.