STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFS25317.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
EFS25319.1
Hypothetical protein.
  
  
 0.693
EFS25318.1
P27 family putative phage terminase, small subunit.
  
    0.679
EFS25320.1
HK97 family phage portal protein.
  
  
 0.588
EFS25321.2
Hypothetical protein.
  
    0.523
EFS25324.1
Hypothetical protein.
  
    0.518
EFS25322.1
HK97 family phage major capsid protein.
  
    0.513
EFS25323.1
Hypothetical protein.
       0.498
EFS25326.1
Hypothetical protein.
       0.495
EFS25327.2
Hypothetical protein.
       0.489
EFS25325.1
Hypothetical protein.
       0.487
Your Current Organism:
Fusobacterium ulcerans
NCBI taxonomy Id: 469617
Other names: F. ulcerans ATCC 49185, Fusobacterium ulcerans ATCC 49185
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.