Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFS24912.1 | EFS25369.1 | FUAG_00427 | FUAG_00884 | Hypothetical protein. | Hypothetical protein. | 0.438 |
EFS25368.1 | EFS25369.1 | FUAG_00883 | FUAG_00884 | Hypothetical protein. | Hypothetical protein. | 0.690 |
EFS25368.1 | EFS25370.2 | FUAG_00883 | FUAG_00885 | Hypothetical protein. | Hypothetical protein. | 0.679 |
EFS25368.1 | EFS25371.1 | FUAG_00883 | FUAG_00886 | Hypothetical protein. | Hypothetical protein. | 0.745 |
EFS25368.1 | EFS25373.1 | FUAG_00883 | FUAG_00888 | Hypothetical protein. | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.457 |
EFS25368.1 | accB | FUAG_00883 | FUAG_00882 | Hypothetical protein. | acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.440 |
EFS25368.1 | apt | FUAG_00883 | FUAG_00887 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.651 |
EFS25368.1 | tgt | FUAG_00883 | FUAG_00889 | Hypothetical protein. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.454 |
EFS25369.1 | EFS24912.1 | FUAG_00884 | FUAG_00427 | Hypothetical protein. | Hypothetical protein. | 0.438 |
EFS25369.1 | EFS25368.1 | FUAG_00884 | FUAG_00883 | Hypothetical protein. | Hypothetical protein. | 0.690 |
EFS25369.1 | EFS25370.2 | FUAG_00884 | FUAG_00885 | Hypothetical protein. | Hypothetical protein. | 0.786 |
EFS25369.1 | EFS25371.1 | FUAG_00884 | FUAG_00886 | Hypothetical protein. | Hypothetical protein. | 0.786 |
EFS25369.1 | EFS25373.1 | FUAG_00884 | FUAG_00888 | Hypothetical protein. | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.533 |
EFS25369.1 | accB | FUAG_00884 | FUAG_00882 | Hypothetical protein. | acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.428 |
EFS25369.1 | apt | FUAG_00884 | FUAG_00887 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.765 |
EFS25369.1 | folD | FUAG_00884 | FUAG_00880 | Hypothetical protein. | Hypothetical protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.507 |
EFS25369.1 | guaA | FUAG_00884 | FUAG_02567 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.442 |
EFS25369.1 | tgt | FUAG_00884 | FUAG_00889 | Hypothetical protein. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.497 |
EFS25370.2 | EFS25368.1 | FUAG_00885 | FUAG_00883 | Hypothetical protein. | Hypothetical protein. | 0.679 |
EFS25370.2 | EFS25369.1 | FUAG_00885 | FUAG_00884 | Hypothetical protein. | Hypothetical protein. | 0.786 |
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