STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFS26348.2Hypothetical protein. (507 aa)    
Predicted Functional Partners:
EFS26927.1
Hypothetical protein.
 
 0.832
EFS26928.1
Hypothetical protein.
 
 0.823
EFS27461.1
Hypothetical protein.
 
 0.788
EFS27460.2
Hypothetical protein.
 
 0.735
EFS26828.1
Hypothetical protein.
 
 0.722
EFS26829.1
Nickel ABC transporter, permease subunit NikB.
 
 0.718
EFS26347.2
Hypothetical protein.
       0.709
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
    0.629
EFS24604.2
Hypothetical protein.
  
  
 
0.544
EFS27459.1
Hypothetical protein.
  
  
 
0.528
Your Current Organism:
Fusobacterium ulcerans
NCBI taxonomy Id: 469617
Other names: F. ulcerans ATCC 49185, Fusobacterium ulcerans ATCC 49185
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.