STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFS27373.2Hypothetical protein. (217 aa)    
Predicted Functional Partners:
EFS26315.1
Hypothetical protein.
  
 
 0.708
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
   0.639
EFS25352.1
Hypothetical protein.
  
 
 0.587
EFS24928.2
Hypothetical protein.
 
  
 0.474
EFS25063.1
Hypothetical protein.
  
 
 0.471
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.471
EFS25093.1
LolC/E family lipoprotein releasing system, transmembrane protein.
  
 
 0.464
EFS26733.1
Hypothetical protein.
  
   
 0.461
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
    0.449
EFS25890.1
Hypothetical protein.
 
   
 0.444
Your Current Organism:
Fusobacterium ulcerans
NCBI taxonomy Id: 469617
Other names: F. ulcerans ATCC 49185, Fusobacterium ulcerans ATCC 49185
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.