STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFS27484.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
EFS27486.1
AgaS family putative sugar isomerase.
 
  
 0.698
EFS24534.2
Hypothetical protein.
  
    0.586
EFS26373.1
Hypothetical protein.
  
   
 0.586
EFS27310.1
Hypothetical protein.
 
  
 0.567
EFS27483.1
Hypothetical protein.
  
    0.534
EFS27485.1
ROK family protein (putative glucokinase).
  
    0.526
EFS26289.1
Hypothetical protein.
  
   
 0.502
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.483
EFS25504.1
Hypothetical protein.
  
   
 0.480
EFS25688.2
Hypothetical protein.
  
  
 0.475
Your Current Organism:
Fusobacterium ulcerans
NCBI taxonomy Id: 469617
Other names: F. ulcerans ATCC 49185, Fusobacterium ulcerans ATCC 49185
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.