Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFS25560.2 | nifU | FUAG_01075 | FUAG_03017 | Hypothetical protein. | FeS cluster assembly scaffold protein NifU. | 0.723 |
EFS26162.1 | EFS27606.1 | FUAG_01677 | FUAG_03121 | Cysteine desulfurase. | YqeB family selenium-dependent molybdenum hydroxylase system protein. | 0.686 |
EFS26162.1 | dnaK | FUAG_01677 | FUAG_02989 | Cysteine desulfurase. | Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.456 |
EFS26162.1 | nifJ | FUAG_01677 | FUAG_01593 | Cysteine desulfurase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.421 |
EFS26162.1 | nifU | FUAG_01677 | FUAG_03017 | Cysteine desulfurase. | FeS cluster assembly scaffold protein NifU. | 0.942 |
EFS26564.2 | nifJ | FUAG_02079 | FUAG_01593 | Hypothetical protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.450 |
EFS26564.2 | nifS | FUAG_02079 | FUAG_03016 | Hypothetical protein. | Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.418 |
EFS26564.2 | nifU | FUAG_02079 | FUAG_03017 | Hypothetical protein. | FeS cluster assembly scaffold protein NifU. | 0.872 |
EFS26951.1 | nifJ | FUAG_02466 | FUAG_01593 | Hypothetical protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.766 |
EFS26951.1 | nifS | FUAG_02466 | FUAG_03016 | Hypothetical protein. | Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.733 |
EFS26951.1 | nifU | FUAG_02466 | FUAG_03017 | Hypothetical protein. | FeS cluster assembly scaffold protein NifU. | 0.659 |
EFS27606.1 | EFS26162.1 | FUAG_03121 | FUAG_01677 | YqeB family selenium-dependent molybdenum hydroxylase system protein. | Cysteine desulfurase. | 0.686 |
EFS27606.1 | nifJ | FUAG_03121 | FUAG_01593 | YqeB family selenium-dependent molybdenum hydroxylase system protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.421 |
EFS27606.1 | nifU | FUAG_03121 | FUAG_03017 | YqeB family selenium-dependent molybdenum hydroxylase system protein. | FeS cluster assembly scaffold protein NifU. | 0.942 |
cls | nifU | FUAG_02036 | FUAG_03017 | Hypothetical protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | FeS cluster assembly scaffold protein NifU. | 0.778 |
dnaK | EFS26162.1 | FUAG_02989 | FUAG_01677 | Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Cysteine desulfurase. | 0.456 |
dnaK | nifJ | FUAG_02989 | FUAG_01593 | Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.450 |
dnaK | nifS | FUAG_02989 | FUAG_03016 | Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.617 |
dnaK | nifU | FUAG_02989 | FUAG_03017 | Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | FeS cluster assembly scaffold protein NifU. | 0.872 |
nifJ | EFS26162.1 | FUAG_01593 | FUAG_01677 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Cysteine desulfurase. | 0.421 |
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