STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFS27641.2Putative selenium metabolism hydrolase. (394 aa)    
Predicted Functional Partners:
dpaL-2
Diaminopropionate ammonia-lyase.
  
 0.921
hydA
Dihydropyrimidinase.
 
  
 0.781
EFS26853.1
Hypothetical protein.
 
    0.754
EFS24718.1
Hypothetical protein.
 
    0.663
EFS25812.1
Putative endoribonuclease L-PSP.
  
    0.643
EFS26911.1
Hypothetical protein.
 
    0.575
dpaL
Diaminopropionate ammonia-lyase.
  
 0.566
EFS25815.1
Putative selenium metabolism protein SsnA.
 
    0.558
xdh
Selenium-dependent molybdenum hydroxylase 1.
 
   
 0.550
EJZ44679.1
Hypothetical protein.
 
  
 0.453
Your Current Organism:
Fusobacterium ulcerans
NCBI taxonomy Id: 469617
Other names: F. ulcerans ATCC 49185, Fusobacterium ulcerans ATCC 49185
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.