Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EES62330.1 | EES62332.1 | FVAG_00019 | FVAG_00021 | Hypothetical protein. | Transcriptional regulator, Rrf2 family. | 0.772 |
EES62330.1 | EES62333.1 | FVAG_00019 | FVAG_00022 | Hypothetical protein. | RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.766 |
EES62330.1 | EES62335.1 | FVAG_00019 | FVAG_00024 | Hypothetical protein. | Hypothetical protein. | 0.762 |
EES62330.1 | EES62336.1 | FVAG_00019 | FVAG_00025 | Hypothetical protein. | Hypothetical protein. | 0.726 |
EES62330.1 | EES62339.1 | FVAG_00019 | FVAG_00028 | Hypothetical protein. | RNA-binding protein, YhbY family. | 0.539 |
EES62330.1 | EES62340.1 | FVAG_00019 | FVAG_00029 | Hypothetical protein. | Divergent PAP2 family. | 0.489 |
EES62330.1 | mrdA | FVAG_00019 | FVAG_00026 | Hypothetical protein. | Penicillin-binding protein 2. | 0.746 |
EES62330.1 | rnj | FVAG_00019 | FVAG_00027 | Hypothetical protein. | Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.560 |
EES62330.1 | ruvB | FVAG_00019 | FVAG_00020 | Hypothetical protein. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.785 |
EES62330.1 | yqeV | FVAG_00019 | FVAG_00023 | Hypothetical protein. | tRNA methylthiotransferase YqeV. | 0.762 |
EES62332.1 | EES62330.1 | FVAG_00021 | FVAG_00019 | Transcriptional regulator, Rrf2 family. | Hypothetical protein. | 0.772 |
EES62332.1 | EES62333.1 | FVAG_00021 | FVAG_00022 | Transcriptional regulator, Rrf2 family. | RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.780 |
EES62332.1 | EES62335.1 | FVAG_00021 | FVAG_00024 | Transcriptional regulator, Rrf2 family. | Hypothetical protein. | 0.780 |
EES62332.1 | EES62336.1 | FVAG_00021 | FVAG_00025 | Transcriptional regulator, Rrf2 family. | Hypothetical protein. | 0.746 |
EES62332.1 | EES62339.1 | FVAG_00021 | FVAG_00028 | Transcriptional regulator, Rrf2 family. | RNA-binding protein, YhbY family. | 0.543 |
EES62332.1 | EES62340.1 | FVAG_00021 | FVAG_00029 | Transcriptional regulator, Rrf2 family. | Divergent PAP2 family. | 0.488 |
EES62332.1 | mrdA | FVAG_00021 | FVAG_00026 | Transcriptional regulator, Rrf2 family. | Penicillin-binding protein 2. | 0.789 |
EES62332.1 | rnj | FVAG_00021 | FVAG_00027 | Transcriptional regulator, Rrf2 family. | Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.572 |
EES62332.1 | ruvB | FVAG_00021 | FVAG_00020 | Transcriptional regulator, Rrf2 family. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.790 |
EES62332.1 | yqeV | FVAG_00021 | FVAG_00023 | Transcriptional regulator, Rrf2 family. | tRNA methylthiotransferase YqeV. | 0.814 |
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