Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES62510.2TonB-dependent receptor. (688 aa)    
Predicted Functional Partners:
EES63019.2
TonB family domain protein.
 
 
 0.829
EES63187.1
TonB family domain protein.
 
 
 0.796
EES65181.1
Outer membrane efflux protein.
  
   
 0.591
EES65177.2
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   
 0.588
EES65180.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   
 0.566
EES65004.1
Transporter, MotA/TolQ/ExbB proton channel family protein.
 
  
 0.549
EES63017.1
Transporter, MotA/TolQ/ExbB proton channel family protein.
 
  
 0.534
EES63200.1
Putative flagellar protein FliS.
 
  
 0.524
EES63195.1
Periplasmic binding protein.
 
  
 0.519
EES63189.1
Transporter, MotA/TolQ/ExbB proton channel family protein.
 
  
 0.517
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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