Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES62550.2ABC transporter, substrate-binding protein, family 5. (495 aa)    
Predicted Functional Partners:
dppC
Dipeptide ABC transporter, permease protein DppC.
 0.855
gsiC
Glutathione ABC transporter, permease protein GsiC.
 
 
 0.852
EES64180.1
Putative oligopeptide ABC transporter, permease protein AppC.
 
 0.831
EES63700.1
Putative dipeptide ABC transporter, permease protein DppC.
 
 0.822
EES63699.1
Putative nickel transport system permease protein NikB.
 
 
 0.794
EES64179.1
ABC transporter, permease protein.
 
 
 0.792
EES62402.1
ABC transporter, substrate-binding protein, QAT family.
   
 
 0.733
nifJ
Pyruvate synthase.
  
    0.705
oppD
Oligopeptide ABC transporter, ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
 
 0.632
appF
Oligopeptide ABC transporter, ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
 
 
 0.601
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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