Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EES62662.1Glycosyltransferase, group 1 family protein. (384 aa)    
Predicted Functional Partners:
EES62663.1
Polysaccharide deacetylase.
  
  
 0.780
EES62661.1
Heptosyltransferase.
  
    0.779
EES62664.1
Glycosyltransferase, group 2 family protein.
  
  
 0.744
EES62665.2
Hypothetical protein.
       0.707
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.646
rfbB
dTDP-glucose 4,6-dehydratase.
  
  
 0.566
EES62666.1
Hypothetical protein.
  
  
 0.558
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.551
rfaY-2
Lipopolysaccharide core biosynthesis protein RfaY.
       0.523
EES62668.1
Polysaccharide deacetylase.
  
  
 0.501
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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