Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES62797.1HTH domain protein. (469 aa)    
Predicted Functional Partners:
EES62453.1
PRD domain protein.
 
  
 0.788
EES64552.2
PTS system, Lactose/Cellobiose specific IIB subunit.
 
  
 0.765
EES62763.1
PRD domain protein.
 
  
 0.764
EES64039.2
Putative PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.748
EES63330.1
PRD domain protein.
 
  
 0.745
licB
Lichenan-specific phosphotransferase enzyme IIB component.
 
  
 0.742
EES62438.1
Phosphotransferase system, EIIB.
  
 
 0.730
EES62796.1
Hypothetical protein.
       0.727
EES64553.1
Putative sugar-specific permease, SgaT/UlaA.
 
  
 0.723
chbA
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component.
 
  
 0.707
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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