Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES62831.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
EES62830.1
Hypothetical protein; Belongs to the UPF0246 family.
       0.777
EES62832.1
Peptidase, M16 family; Belongs to the peptidase M16 family.
 
     0.770
EES62833.1
Hypothetical protein.
 
     0.713
EES62671.1
Hypothetical protein.
  
     0.627
EES65072.2
HAD hydrolase, family IB.
 
     0.576
EES62834.1
Aminopeptidase II.
 
     0.528
EES64015.2
Hypothetical protein.
  
     0.524
EES63326.1
Outer membrane efflux protein.
 
     0.508
EES64409.1
Hypothetical protein.
  
     0.503
EGR54250.1
Hypothetical protein.
 
   
 0.499
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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