Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
asrASulfite reductase, subunit A. (345 aa)    
Predicted Functional Partners:
asrB
Sulfite reductase, subunit B.
 
 0.995
asrC
Sulfite reductase, subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.995
EES62965.1
Putative CoA-disulfide reductase.
 
 
 0.939
EES64118.1
Nitrite/sulfite reductase ferredoxin domain protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
  0.902
EES63964.1
Hypothetical protein.
  
 
 0.835
AsrB
Oxidoreductase NAD-binding domain protein.
  
 0.811
EES62558.1
Rubredoxin.
  
  
 0.651
nifJ
Pyruvate synthase.
     
 0.596
EES63483.1
Cysteine-rich domain protein.
 
 
 
 0.542
gltA
Glutamate synthase (NADPH), homotetrameric.
  
  
 0.532
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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