Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63083.1YqaJ viral recombinase family protein. (365 aa)    
Predicted Functional Partners:
EES63082.1
Recombinase, phage RecT family.
 
     0.935
EES63081.1
Hypothetical protein.
       0.608
EES63084.1
Hypothetical protein.
       0.572
EES63085.1
Hypothetical protein.
       0.572
EES63079.1
Hypothetical protein.
       0.508
EES63080.1
Hypothetical protein.
       0.508
EGR54256.1
Hypothetical protein.
       0.508
EES63412.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.