Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63092.1Toxin-antitoxin system, antitoxin component, AbrB family. (112 aa)    
Predicted Functional Partners:
EES63091.1
Toxin-antitoxin system, toxin component, RelE family.
 
  
 0.971
EES63093.1
Hypothetical protein.
       0.524
EES63231.1
Toxin-antitoxin system, antitoxin component, HicB family.
 
  
 0.513
EES62771.1
Toxin-antitoxin system, antitoxin component, HicB family.
 
  
 0.481
EES63444.1
Addiction module antitoxin, RelB/DinJ family.
 
  
 0.469
EES62770.1
Toxin-antitoxin system, toxin component, HicA family.
  
  
 0.419
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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