Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EES63165.1Putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD. (342 aa)    
Predicted Functional Partners:
potC
Spermidine/putrescine ABC transporter membrane protein.
 0.999
PotB
Putative spermidine/putrescine ABC transporter, permease protein PotB.
 
 
 0.992
potA
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.979
EES62514.1
ABC transporter, permease protein; Overlaps another CDS with the same product name.
  
 0.913
EES64513.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.815
EES63851.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.792
EES62515.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.777
EES64979.2
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.776
dnaN
DNA polymerase III, beta subunit.
       0.728
EES65078.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.689
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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