Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63197.1TonB-dependent receptor. (676 aa)    
Predicted Functional Partners:
EES63200.1
Putative flagellar protein FliS.
 
   
 0.830
EES63187.1
TonB family domain protein.
 
 
 
 0.805
EES63019.2
TonB family domain protein.
 
 
 
 0.803
EES63198.1
Putative corrinoid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.738
EES63196.1
Radical SAM domain protein.
 
   
 0.733
EES63199.1
Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE.
       0.685
EES63195.1
Periplasmic binding protein.
 
   
 0.634
EES63786.1
POTRA domain protein, ShlB-type.
  
  
  0.595
EES65177.2
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.593
EES65181.1
Outer membrane efflux protein.
  
   
 0.586
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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