Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
livHHigh-affinity branched-chain amino acid ABC transporter, permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (294 aa)    
Predicted Functional Partners:
EES63343.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
EES63344.1
ABC transporter, ATP-binding protein.
 
 
 0.999
EES63341.1
Receptor family ligand-binding protein.
 
 
 0.998
EES63345.1
ABC transporter, ATP-binding protein.
 
 
 0.998
EES63346.1
Methyltransferase domain protein.
     
 0.689
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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