Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63383.1ABC transporter, substrate-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family. (252 aa)    
Predicted Functional Partners:
EES64671.1
Chorismate mutase.
    
 0.924
EES64676.1
Prephenate dehydrogenase.
    
 0.907
AspC
Aminotransferase, class I/II.
    
 0.900
EES63316.1
ACT domain protein PheB family protein; Belongs to the UPF0735 family.
     
  0.900
EES64451.1
ACT domain protein; Belongs to the UPF0735 family.
     
  0.900
EES63884.1
ABC transporter, permease protein.
 0.879
artQ
Arginine ABC transporter, permease protein ArtQ.
 
 0.868
artM
Arginine ABC transporter, ATP-binding protein ArtM.
 
 0.863
glnQ
Glutamine ABC transporter, ATP-binding protein GlnQ.
 
 0.831
EES62402.1
ABC transporter, substrate-binding protein, QAT family.
     
 0.786
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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