Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63399.2Hypothetical protein. (1386 aa)    
Predicted Functional Partners:
EES63400.2
Hypothetical protein.
       0.773
EES63401.1
Hypothetical protein.
       0.773
EES63398.1
Hypothetical protein.
       0.757
EES63402.1
Hypothetical protein.
       0.727
EES63403.1
Hypothetical protein.
       0.727
EES63396.1
Hypothetical protein.
       0.721
EES63397.1
Hypothetical protein.
       0.721
EES63395.1
Tetratricopeptide repeat protein.
       0.647
EES63404.1
Hypothetical protein.
       0.472
EES63405.2
Hypothetical protein.
       0.463
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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