Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63411.1Hypothetical protein. (403 aa)    
Predicted Functional Partners:
EES63412.1
Hypothetical protein.
 
 
 0.913
EES63415.1
DnaJ domain protein.
  
  0.861
EES65293.1
Hypothetical protein.
  
 0.826
EES63409.1
Hypothetical protein.
 
 
 0.809
EES63408.2
Hypothetical protein.
  
 0.790
pcp
Pyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
    
   0.743
EES63413.2
FHA domain protein.
  
 
 0.712
EES62788.1
Ankyrin repeat protein.
  
 0.689
EES62866.1
Ankyrin repeat protein.
  
 0.689
EES63416.1
Hypothetical protein.
       0.680
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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