Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES63483.1Cysteine-rich domain protein. (256 aa)    
Predicted Functional Partners:
EES63480.1
Methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.998
EES63481.1
4Fe-4S binding domain protein.
 
 0.998
EES63482.1
Heterodisulfide reductase subunit family protein.
 
 0.995
EES63479.1
4Fe-4S binding domain protein.
 
  
 0.991
EES63478.1
Hypothetical protein.
 
 
 0.935
EES63476.1
2Fe-2S iron-sulfur cluster binding domain protein.
 
   
 0.917
AsrB
Oxidoreductase NAD-binding domain protein.
 
  
 0.887
EES63475.1
FAD binding domain protein.
 
     0.879
EES64255.2
4Fe-4S binding domain protein.
  
 
 0.862
EES63474.1
Transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family.
 
     0.546
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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