Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EES64536.1Cyclically-permuted mutarotase family protein. (378 aa)    
Predicted Functional Partners:
EES64537.1
Transcriptional regulator, LacI family.
 
     0.718
EES63794.1
Outer membrane autotransporter barrel domain protein.
  
     0.612
EES63251.1
Outer membrane autotransporter barrel domain protein.
  
     0.575
EES62671.1
Hypothetical protein.
  
     0.572
EES62733.1
Tetratricopeptide repeat protein.
  
   
 0.568
EES64542.1
YhcH/YjgK/YiaL family protein.
 
   
 0.562
EES63158.2
META domain protein.
  
     0.530
EES63284.1
Outer membrane insertion signal domain protein.
  
     0.522
nanE
N-acetylmannosamine-6-P epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
  
  
 0.497
hup-16
DNA-binding protein HU; Belongs to the bacterial histone-like protein family.
  
     0.490
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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