STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EES64624.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
EES64625.2
Hypothetical protein.
       0.714
EES64620.1
Phage uncharacterized protein domain protein.
 
     0.630
EES64622.1
Phage protein F-like protein.
       0.626
EES64621.1
Phage portal protein, SPP1 Gp6-like protein.
       0.617
EES64623.1
Hypothetical protein.
       0.601
EES64619.2
Terminase small subunit.
       0.585
EES64618.1
Hypothetical protein.
 
     0.530
EES64626.1
Phage minor structural protein GP20.
       0.493
EES64627.1
Hypothetical protein.
       0.442
EES64631.1
Hypothetical protein.
       0.432
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.