Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES64627.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
EES64626.1
Phage minor structural protein GP20.
 
     0.830
EES64628.1
Hypothetical protein.
       0.778
EES64631.1
Hypothetical protein.
       0.752
EES64630.1
Hypothetical protein.
       0.745
EES64629.1
Hypothetical protein.
       0.731
EES64632.2
Hypothetical protein.
       0.731
EES64633.1
Hypothetical protein.
       0.706
EES64614.1
VRR-NUC domain protein.
 
     0.529
EES64617.1
Hypothetical protein.
 
     0.529
EES64615.2
SNF2 family N-terminal domain protein.
 
     0.481
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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