Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES64641.1Hypothetical protein. (146 aa)    
Predicted Functional Partners:
EES64639.1
LysM domain protein.
  
  
 0.853
EES64642.1
Hypothetical protein.
  
  
 0.850
EES64643.1
Hypothetical protein.
  
  
 0.839
EES64644.2
Hypothetical protein.
  
  
 0.839
EES64638.1
Tape measure domain protein.
       0.805
EES64640.1
Hypothetical protein.
       0.805
EES63608.2
Hypothetical protein.
       0.805
EES64636.1
Phage XkdN-like protein.
  
  
 0.642
EES64635.1
Core tail protein.
  
  
 0.595
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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