Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EES64654.2Prepilin-type cleavage/methylation N-terminal domain protein. (200 aa)    
Predicted Functional Partners:
EES64652.1
Peptidase, A24 family.
       0.773
EES64653.1
Prepilin-type cleavage/methylation N-terminal domain protein.
       0.773
EES64655.2
Hypothetical protein.
       0.773
EES64656.1
Fimbrial assembly protein PilN.
       0.773
EES64657.1
Hypothetical protein.
       0.773
EES64651.1
Prepilin-type cleavage/methylation N-terminal domain protein.
       0.746
EES64650.1
Bacterial type II secretion system domain protein F.
       0.666
EES64649.1
Putative general secretion pathway protein E.
       0.644
EES64658.1
Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
       0.639
rfaE-2
Bifunctional protein RfaE, domain I.
       0.589
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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