Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES64780.1Tetratricopeptide repeat protein. (192 aa)    
Predicted Functional Partners:
EES63886.1
Tetratricopeptide repeat protein.
 
 
 
 0.771
EES62894.1
Tetratricopeptide repeat protein.
 
 
 
 0.712
EES64156.1
Tetratricopeptide repeat protein.
 
 
 
 0.658
EES64781.1
DnaJ domain protein.
  
    0.579
gltX
glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
 
     0.557
EES64574.1
Peptidase, M23 family.
 
 
   0.537
EES64809.1
Hypothetical protein.
  
     0.527
EES62733.1
Tetratricopeptide repeat protein.
  
     0.526
EES62788.1
Ankyrin repeat protein.
 
   
 0.517
rfaY-3
Lipopolysaccharide core biosynthesis protein RfaY.
  
     0.480
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.