Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES64814.1Putative EF_0831/AHA_3912 family protein. (94 aa)    
Predicted Functional Partners:
EES64815.1
EF_0832/AHA_3913 family protein.
       0.750
EES64813.1
EF_0830/AHA_3911 family protein.
       0.709
EES64816.1
EF_0833/AHA_3914 family protein.
       0.683
EES64817.1
Putative pyridoxal phosphate-dependent enzyme.
       0.612
EES64812.1
Hypothetical protein.
       0.605
EES64818.1
EF_0839/AHA_3917 family protein.
       0.588
EES64819.2
HAD hydrolase, family IA, variant 3.
       0.588
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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