STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EES64866.1STAS domain protein; Belongs to the anti-sigma-factor antagonist family. (115 aa)    
Predicted Functional Partners:
EES64865.2
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
 
 0.998
EES64324.1
Stage II sporulation protein E.
 
 
 0.977
EES63963.1
Diguanylate cyclase (GGDEF) domain protein.
  
  
 0.937
EGR54225.1
Hypothetical protein.
       0.787
rny
YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
       0.739
EES62803.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
  
 0.737
thiH
Thiazole biosynthesis protein ThiH.
  
    0.708
hydG
Iron-only hydrogenase maturation rSAM protein HydG.
  
    0.708
EES63962.1
Hypothetical protein.
  
  
 0.657
EES63497.1
Cyclic diguanylate phosphodiesterase (EAL) domain protein.
  
  
 0.656
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.