Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES64894.1TRAP transporter solute receptor, DctP family. (334 aa)    
Predicted Functional Partners:
siaT
Sialic acid TRAP transporter permease protein SiaT.
 
 
 0.957
EES64895.1
TRAP transporter, DctQ-like membrane protein.
 
 
 0.957
EES64896.1
TRAP transporter, DctM subunit.
 
 
 0.940
EES64749.1
TRAP transporter, DctQ-like membrane protein.
 
 
 0.859
EES62354.1
TRAP transporter, DctM subunit.
 
 
 0.828
EES64750.1
TRAP transporter, DctM subunit.
 
 
 0.828
EES64276.1
TRAP transporter, DctM subunit.
 
 
 0.828
EES64275.1
TRAP transporter, DctQ-like membrane protein.
 
 
 0.755
EES62353.1
TRAP transporter, DctQ-like membrane protein.
 
 
 0.730
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
     0.645
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
Server load: medium (56%) [HD]