Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EES64966.1HMGL-like protein. (303 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase.
  
 
 0.971
EES64963.1
3-methyl-2-oxobutanoate dehydrogenase (ferredoxin).
  
 
 0.954
EES64962.1
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein.
  
 
 0.951
EES64354.2
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.943
EES64371.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.943
ctfA
Butyrate--acetoacetate CoA-transferase subunit A.
  
 
 0.940
ctfB
Butyrate--acetoacetate CoA-transferase subunit B.
  
 
 0.938
EES64967.1
CoA-transferase family III protein; Belongs to the CoA-transferase III family.
 
 
 0.927
pflB
Formate C-acetyltransferase.
     
 0.910
EES63528.2
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family.
    
 0.909
Your Current Organism:
Fusobacterium varium
NCBI taxonomy Id: 469618
Other names: F. varium ATCC 27725, Fusobacterium varium ATCC 27725
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